I think the easiest explanation could be a result of genetic engineering. Perhaps for sexual selection?
There really isn't a pinnacle of evolution since there is no end goal. A population may be very well suited to an environment, but if you change the environment, that population is no longer well suited and different traits will propagate.
Some birds, like pigeons, have crop milk that they feed to young, but that's produced in the crop. Maybe a mutation moved the production if you want to pseudoscience it?
If they are aliens, then you can always claim different environmental pressures and different lineage than Earthly avians.